BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029E12SP1|AL429080
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig131 643 0.0
>3x_Contig131
Length = 998
Score = 643 bits (324), Expect = 0.0
Identities = 343/348 (98%), Gaps = 1/348 (0%)
Strand = Plus / Plus
Query: 1 gatcttcaattatactcattactcgcaacagttattgggcttttaccatcattcattata 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gatcttcaattatactcattactcgcaacagttattgggcttttaccatcattcattatc 626
Query: 61 acatttttatacccgaagagacatttactaccatatgctttggccgcatgttcgatgtca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aaatttttatacccgaagagacatttactaccatatgctttggccgcatgttcgatgtca 686
Query: 121 ttcttcttattcagcttccaggttcatgaaaagacaatcttattacctttacttcctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttcttcttattcagcttccaggttcatgaaaagacaatcttattacctttacttcctatt 746
Query: 181 acactcttgtacacgtcaagagattggaatgttctatcattggtttgttggattaacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 acactcttgtacacgtcaagagattggaatgttctatcattggtttgttggattaacaac 806
Query: 241 gtgg-cattgtttacactctggccattactgaaaaaggacaatctagtattgcaatatgg 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 807 gtggacattgtttacactctggccattactgaaaaaggacaatctagtattgccatatgg 866
Query: 300 agtcatgttcatgtttagcaattggttgatcggtaacttcagtttcgt 347
|||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 867 agtcatgttcatgtttagcaattggttgataggtaacttcagtttcgt 914
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6933
Number of Sequences: 1807
Number of extensions: 6933
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)